CPIRT Publications

2024

Performance of two modified two-tier algorithms for the serologic diagnosis of Lyme disease.Landry ML, Hassan S, Rottmann BG, Pesak SJ, Ordazzo M, Skrzyniarz M, Deponte S, Peaper DR. J Clin Microbiol. 2024 Apr 10; 2024 Apr 10. PMID: 38597655.
Randomized Phase II Trial of Imiquimod with or without 9-Valent HPV Vaccine versus Observation in Patients with High-grade Pre-neoplastic Cervical Lesions (NCT02864147).Sheth SS, Oh JE, Bellone S, Siegel ER, Greenman M, Mutlu L, McNamara B, Pathy S, Clark M, Azodi M, Altwerger G, Andikyan V, Huang G, Ratner E, Kim DJ, Iwasaki A, Levi AW, Buza N, Hui P, Flaherty S, Schwartz PE, Santin AD. Clin Cancer Res. 2024 Apr 9; 2024 Apr 9. PMID: 38592381.
"Rounding Third Base and Heading Home": Arthritis & Rheumatology in 2024.Solomon DH, Kaplan MJ, Nigrovic PA, Bucala R. Arthritis Rheumatol. 2024 Apr 4; 2024 Apr 4. PMID: 38572586.
Corrigendum to "Extensive transmission of SARS-CoV-2 BQ.1* variant in a population with high levels of hybrid immunity: A prevalence survey" [International Journal of Infectious Diseases 139 (2024) 159-167].Aguilar Ticona JP, Xiao M, Li D, Nery JN, Hitchings M, Andrade Belitardo EMM, Fofana MO, Victoriano R, Cruz JS, de Moraes L, Strobel IM, Silva JJ, Sena do Aragão Filho A, Ribeiro GS, Reis MG, Costa F, Khouri R, Ko AI, Cummings DAT. Int J Infect Dis. 2024 Apr; 2024 Mar 6. PMID: 38452689.
Compartmentalized ocular lymphatic system mediates eye-brain immunity.Yin X, Zhang S, Lee JH, Dong H, Mourgkos G, Terwilliger G, Kraus A, Geraldo LH, Poulet M, Fischer S, Zhou T, Mohammed FS, Zhou J, Wang Y, Malloy S, Rohner N, Sharma L, Salinas I, Eichmann A, Thomas JL, Saltzman WM, Huttner A, Zeiss C, Ring A, Iwasaki A, Song E. Nature. 2024 Apr; 2024 Feb 28. PMID: 38418880.
A small molecule macrophage migration inhibitory factor agonist ameliorates age-related myocardial intolerance to ischemia-reperfusion insults via metabolic regulation.Wang H, Slotabec L, Didik S, Li Z, Leng L, Zhao B, Bucala R, Li J. Metabolism. 2024 Apr; 2024 Jan 15. PMID: 38232801.
Estimated population-level impact of pneumococcal conjugate vaccines against all-cause pneumonia mortality among unvaccinated age groups in five Latin American countries.Prunas O, Shioda K, Toscano CM, Bastias M, Valenzuela-Bravo MT, Diaz Tito J, Warren JL, Weinberger DM, de Oliveira LH. J Infect Dis. 2024 Mar 19; 2024 Mar 19. PMID: 38502711.
Factors Associated With Long COVID: Insights From Two Nationwide Surveys.Wu Y, Sawano M, Wu Y, Shah RM, Bishop P, Iwasaki A, Krumholz HM. Am J Med. 2024 Mar 14; 2024 Mar 14. PMID: 38490304.
Human iPSC-Based Model of COPD to Investigate Disease Mechanisms, Predict SARS-COV-2 Outcome, and Test Preventive Immunotherapy.Dagher R, Moldobaeva A, Gubbins E, Clark S, Madel Alfajaro M, Wilen CB, Hawkins F, Qu X, Chien Chiang C, Li Y, Clarke L, Ikeda Y, Brown C, Kolbeck R, Ma Q, Rojas M, Koff JL, Ghaedi M. Stem Cells. 2024 Mar 14. PMID: 38183264.
Proceedings of the Clinical Microbiology Open 2022-assessing clinical laboratory and industry responses to COVID-19 pandemic testing capacity challenges (part 1).Peaper DR, Doern CD, Sharp S. J Clin Microbiol. 2024 Mar 13; 2024 Feb 20. PMID: 38379142.
Interventions to support fellowship application success among predoctoral physician-scientists.Fitzsimonds RM, Gorelick FS, Kazmierczak BI. JCI Insight. 2024 Mar 8; 2024 Mar 8. PMID: 38456505.
Atypical pneumonia testing in transplant recipients.Feller F, Trubin P, Malinis M, Vogel JS, Merwede J, Peaper DR, Azar MM. Transpl Infect Dis. 2024 Mar 2; 2024 Mar 2. PMID: 38430482.
Overestimation of Severe Acute Respiratory Syndrome Coronavirus 2 Household Transmission in Settings of High Community Transmission: Insights From an Informal Settlement Community in Salvador, Brazil.Aguilar Ticona JP, Nery N Jr, Hitchings M, Belitardo EMMA, Fofana MO, Dorión M, Victoriano R, Cruz JS, Oliveira Santana J, de Moraes LEP, Cardoso CW, Ribeiro GS, Reis MG, Khouri R, Costa F, Ko AI, Cummings DAT. Open Forum Infect Dis. 2024 Mar; 2024 Feb 5. PMID: 38516384.
Hypertension Control During the Coronavirus Disease 2019 Pandemic: A Cohort Study Among US Veterans.Korves C, Peixoto AJ, Lucas BP, Davies L, Weinberger DM, Rentsch C, Vashi A, Young-Xu Y, King J Jr, Asch SM, Justice AC. Med Care. 2024 Mar 1; 2024 Jan 17. PMID: 38284412.
Novel Approaches to Multidrug-Resistant Infections in Cystic Fibrosis.Murray TS, Stanley G, Koff JL. Infect Dis Clin North Am. 2024 Mar. PMID: 38280761.
Incorporating Efficacy Data from Initial Trials Into Subsequent Evaluations: Application to Vaccines Against Respiratory Syncytial Virus.Warren JL, Sundaram M, Pitzer VE, Omer SB, Weinberger DM. Epidemiology. 2024 Mar 1; 2023 Nov 14. PMID: 37963353.
The Emerging Spectrum of Somatic Mutation in Rheumatic Disease: Clonal Hematopoiesis Connects Aging With Giant Cell Arteritis.Bucala R, Tsao BP. Arthritis Rheumatol. 2024 Mar; 2024 Jan 3. PMID: 37961826.
The role of viral interference in shaping RSV epidemics following the 2009 H1N1 influenza pandemic.Li K, Thindwa D, Weinberger DM, Pitzer VE. medRxiv. 2024 Feb 27; 2024 Feb 27. PMID: 38464193.
Aberrant immune programming in neutrophils in cystic fibrosis.Hu Y, Bojanowski CM, Britto CJ, Wellems D, Song K, Scull C, Jennings S, Li J, Kolls JK, Wang G. J Leukoc Biol. 2024 Feb 23. PMID: 37939820.
Anti-Inflammatory Roles of Type I Interferon Signaling in the Lung.Feng J, Liu Y, Kim J, Ahangari F, Kaminski N, Bain WG, Jie Z, Dela Cruz CS, Sharma L. Am J Physiol Lung Cell Mol Physiol. 2024 Feb 20; 2024 Feb 20. PMID: 38375579.
Developmental changes in lung function of mice are independent of sex as a biological variable.Bärnthaler T, Ramachandra AB, Ebanks S, Guerrera N, Sharma L, Dela Cruz CS, Humphrey JD, Manning EP. Am J Physiol Lung Cell Mol Physiol. 2024 Feb 20; 2024 Feb 20. PMID: 38375577.
Retrospective evaluation of clinical decision support for within-laboratory optimization of SARS-CoV-2 NAAT workflow.Durant TJS, Peaper DR. J Clin Microbiol. 2024 Feb 14; 2023 Dec 22. PMID: 38132702.
Lytic bacteriophages interact with respiratory epithelial cells and induce the secretion of antiviral and proinflammatory cytokines.Zamora PF, Reidy TG, Armbruster CR, Sun M, Van Tyne D, Turner PE, Koff JL, Bomberger JM. bioRxiv. 2024 Feb 6; 2024 Feb 6. PMID: 38370761.
Prior Influenza Infection Mitigates SARS-CoV-2 Disease in Syrian Hamsters.Di Pietro C, Haberman AM, Lindenbach BD, Smith PC, Bruscia EM, Allore HG, Vander Wyk B, Tyagi A, Zeiss CJ. Viruses. 2024 Feb 3; 2024 Feb 3. PMID: 38400021.
Participant Diversity in United States Randomized Controlled Trials of Antibacterials for Staphylococcus aureus Infections, 2000-2021.Kwon J, Pelletiers W, Galloway Peña J, van Duin D, Ledbetter L, Baum K, Ruffin F, Knisely JM, Bizzell E, Fowler VG Jr, Chambers HF, Pettigrew MM. Clin Infect Dis. 2024 Feb 2; 2024 Feb 2. PMID: 38306502.
Optimized preparation pipeline for emergency phage therapy against Pseudomonas aeruginosa at Yale University.Würstle S, Lee A, Kortright KE, Winzig F, An W, Stanley GL, Rajagopalan G, Harris Z, Sun Y, Hu B, Blazanin M, Hajfathalian M, Bollyky PL, Turner PE, Koff JL, Chan BK. Sci Rep. 2024 Feb 1; 2024 Feb 1. PMID: 38302552.
Extensive transmission of SARS-CoV-2 BQ.1* variant in a population with high levels of hybrid immunity: A prevalence survey.Aguilar Ticona JP, Xiao M, Li D, Nery N Jr, Hitchings M, Belitardo EMMA, Fofana MO, Victoriano R, Cruz JS, de Moraes L, Strobel IM, Silva JJ, Sena do Aragão Filho A, Ribeiro GS, Reis MG, Costa F, Khouri R, Ko AI, Cummings DAT. Int J Infect Dis. 2024 Feb; 2023 Dec 7. PMID: 38070701.
Severe acute respiratory coronavirus virus 2 (SARS-CoV-2) RNA and viable virus contamination of hospital emergency department surfaces and association with patient coronavirus disease 2019 (COVID-19) status and aerosol-generating procedures.Roberts SC, Barbell ES, Barber D, Dahlberg SE, Heimer R, Jubanyik K, Parwani V, Pettigrew MM, Tanner JM, Ulrich A, Wade M, Wyllie AL, Yolda-Carr D, Martinello RA, Tanner WD. Infect Control Hosp Epidemiol. 2024 Feb; 2023 Sep 28. PMID: 37767709.
Potential role of RhoA GTPase regulation in type interferon signaling in systemic lupus erythematosus.Fan W, Wei B, Chen X, Zhang Y, Xiao P, Li K, Zhang YQ, Huang J, Leng L, Bucala R. Arthritis Res Ther. 2024 Jan 20; 2024 Jan 20. PMID: 38243295.
Platelet Mitochondrial Fusion and Function in Vascular Integrity.Tyagi T, Yarovinsky TO, Faustino EVS, Hwa J. Circ Res. 2024 Jan 19; 2024 Jan 18. PMID: 38236952.
Impact of COVID-19 vaccination on symptoms and immune phenotypes in vaccine-naïve individuals with Long COVID.Grady CB, Bhattacharjee B, Silva J, Jaycox J, Lee LW, Monteiro VS, Sawano M, Massey D, Caraballo C, Gehlhausen JR, Tabachnikova A, Mao T, Lucas C, Peña-Hernandez MA, Xu L, Tzeng TJ, Takahashi T, Herrin J, Güthe DB, Akrami A, Assaf G, Davis H, Harris K, McCorkell L, Schulz WL, Grffin D, Wei H, Ring AM, Guan L, Cruz CD, Iwasaki A, Krumholz HM. medRxiv. 2024 Jan 12; 2024 Jan 12. PMID: 38260484.
Eco-epidemiological study of seropositivity against Rickettsia and Leptospira agents in rural areas of Urabá, Colombia.Torres-Bustamante M, Cantillo-Barraza O, Ko AI, Wunder EA, Quintero-Vélez JC. Res Sq. 2024 Jan 4; 2024 Jan 4. PMID: 38260656.
MIF contribution to progressive brain diseases.Matejuk A, Benedek G, Bucala R, Matejuk S, Offner H, Vandenbark AA. J Neuroinflammation. 2024 Jan 4; 2024 Jan 4. PMID: 38178143.
Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study.Ozonoff A, Jayavelu ND, Liu S, Melamed E, Milliren CE, Qi J, Geng LN, McComsey GA, Cairns CB, Baden LR, Schaenman J, Shaw AC, Samaha H, Seyfert-Margolis V, Krammer F, Rosen LB, Steen H, Syphurs C, Dandekar R, Shannon CP, Sekaly RP, Ehrlich LIR, Corry DB, Kheradmand F, Atkinson MA, Brakenridge SC, Higuita NIA, Metcalf JP, Hough CL, Messer WB, Pulendran B, Nadeau KC, Davis MM, Sesma AF, Simon V, van Bakel H, Kim-Schulze S, Hafler DA, Levy O, Kraft M, Bime C, Haddad EK, Calfee CS, Erle DJ, Langelier CR, Eckalbar W, Bosinger SE, Peters B, Kleinstein SH, Reed EF, Augustine AD, Diray-Arce J, Maecker HT, Altman MC, Montgomery RR, Becker PM, Rouphael N. Nat Commun. 2024 Jan 3; 2024 Jan 3. PMID: 38172101.
Guidelines on the use of sex and gender in cardiovascular research.Usselman CW, Lindsey ML, Robinson AT, Habecker BA, Taylor CE, Merryman WD, Kimmerly D, Bender JR, Regensteiner JG, Moreau KL, Pilote L, Wenner MM, O'Brien M, Yarovinsky TO, Stachenfeld NS, Charkoudian N, Denfeld QE, Moreira-Bouchard JD, Pyle WG, DeLeon-Pennell KY. Am J Physiol Heart Circ Physiol. 2024 Jan 1; 2023 Nov 24. PMID: 37999647.
Extracellular macrophage migration inhibitory factor (MIF) downregulates adipose hormone-sensitive lipase (HSL) and contributes to obesity.Chen L, Li L, Cui D, Huang Y, Tong H, Zabihi H, Wang S, Qi Y, Lakowski T, Leng L, Liu S, Wu H, Young LH, Bucala R, Qi D. Mol Metab. 2024 Jan; 2023 Nov 5. PMID: 37935315.
Incorporating Data from Multiple Endpoints in the Analysis of Clinical Trials: Example from RSV Vaccines.Prunas O, Willemsen JE, Bont L, Pitzer VE, Warren JL, Weinberger DM. Epidemiology. 2024 Jan 1; 2023 Nov 27. PMID: 37793120.
Immunology for the Rheumatologist: Arthritis & Rheumatology Introduces a New Problem-Based Immunology Review Series With Great Educational Potential.Bucala R, Solomon DH. Arthritis Rheumatol. 2024 Jan; 2023 Oct 23. PMID: 37655656.

2023

Dynamics of chikungunya virus transmission in the first year after its introduction in Brazil: A cohort study in an urban community.Anjos RO, Portilho MM, Jacob-Nascimento LC, Carvalho CX, Moreira PSS, Sacramento GA, Nery Junior NRR, de Oliveira D, Cruz JS, Cardoso CW, Argibay HD, Plante KS, Plante JA, Weaver SC, Kitron UD, Reis MG, Ko AI, Costa F, Ribeiro GS. PLoS Negl Trop Dis. 2023 Dec; 2023 Dec 27. PMID: 38150470.
Excess mortality in US Veterans during the COVID-19 pandemic: an individual-level cohort study.Weinberger DM, Bhaskaran K, Korves C, Lucas BP, Columbo JA, Vashi A, Davies L, Justice AC, Rentsch CT. Int J Epidemiol. 2023 Dec 25. PMID: 37802889.
Distinct hypoxia-induced translational profiles of embryonic and adult-derived macrophages.Wilcox NS, Yarovinsky TO, Pandya P, Ramgolam VS, Moro A, Wu Y, Nicoli S, Hirschi KK, Bender JR. iScience. 2023 Dec 15; 2023 Sep 21. PMID: 38047075.
Waterborne Diseases That Are Sensitive to Climate Variability and Climate Change.Semenza JC, Ko AI. N Engl J Med. 2023 Dec 7. PMID: 38055254.
Potential Impact of Higher-Valency Pneumococcal Conjugate Vaccines Among Adults in Different Localities in Germany.Ellingson MK, Weinberger DM, van der Linden M, Perniciaro S. J Infect Dis. 2023 Dec 6; 2023 Dec 6. PMID: 38059558.
Aging gene signature of memory CD8(+) T cells is associated with neurocognitive functioning in Alzheimer's disease.Young JJ, Park HJ, Kim M, Par-Young J, Bartlett H, Kim HS, Unlu S, Osmani L, Shin MS, Bucala R, van Dyck CH, Allore H, Mecca AP, You S, Kang I. Immun Ageing. 2023 Dec 2; 2023 Dec 2. PMID: 38042785.
Corrigendum to "Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: results from the IMPACC study" [eBioMedicine 83 (2022) 104208].Ozonoff A, Schaenman J, Jayavelu ND, Milliren CE, Calfee CS, Cairns CB, Kraft M, Baden LR, Shaw AC, Krammer F, van Bakel H, Esserman DA, Liu S, Sesma AF, Simon V, Hafler DA, Montgomery RR, Kleinstein SH, Levy O, Bime C, Haddad EK, Erle DJ, Pulendran B, Nadeau KC, Davis MM, Hough CL, Messer WB, Agudelo Higuita NI, Metcalf JP, Atkinson MA, Brakenridge SC, Corry D, Kheradmand F, Ehrlich LIR, Melamed E, McComsey GA, Sekaly R, Diray-Arce J, Peters B, Augustine AD, Reed EF, Altman MC, Becker PM, Rouphael N. EBioMedicine. 2023 Dec; 2023 Nov 1. PMID: 37918220.
A Multiclass Radiomics Method-Based WHO Severity Scale for Improving COVID-19 Patient Assessment and Disease Characterization From CT Scans.Henao JAG, Depotter A, Bower DV, Bajercius H, Todorova PT, Saint-James H, de Mortanges AP, Barroso MC, He J, Yang J, You C, Staib LH, Gange C, Ledda RE, Caminiti C, Silva M, Cortopassi IO, Dela Cruz CS, Hautz W, Bonel HM, Sverzellati N, Duncan JS, Reyes M, Poellinger A. Invest Radiol. 2023 Dec 1; 2023 Jul 27. PMID: 37493348.
Fundamental and frontier research of immune responses to influenza vaccines in human aging: from cross-sectional and longitudinal studies to clinical trials and the geroscience perspective.Leng SX, Shaw AC. Immun Ageing. 2023 Nov 29; 2023 Nov 29. PMID: 38031077.
Predictors of Neurodevelopment in Microcephaly Associated with Congenital Zika Syndrome: A Prospective Study.Mattos AM, Rastely-Junior VN, Pires MM, Aguilar JP, Lessa MSA, Regis C, Wanderley M, Leony J, Bouzon J, Ballalai V, Vieira C, Carvalho GBS, Almeida JRM, Nery N Jr, Leal R, Costa F, Ko AI, Reis MG, Oliveira-Filho J. Children (Basel). 2023 Nov 21; 2023 Nov 21. PMID: 38136033.
The full value of immunisation against respiratory syncytial virus for infants younger than 1 year: effects beyond prevention of acute respiratory illness.Feikin DR, Karron RA, Saha SK, Sparrow E, Srikantiah P, Weinberger DM, Zar HJ. Lancet Infect Dis. 2023 Nov 21; 2023 Nov 21. PMID: 38000374.
Year-Round Respiratory Syncytial Virus Transmission in The Netherlands Following the COVID-19 Pandemic: A Prospective Nationwide Observational and Modeling Study.Löwensteyn YN, Zheng Z, Rave N, Bannier MAGE, Billard MN, Casalegno JS, Pitzer VE, Wildenbeest JG, Weinberger DM, Bont L. J Infect Dis. 2023 Nov 11. PMID: 37477906.
Post-Vaccination Syndrome: A Descriptive Analysis of Reported Symptoms and Patient Experiences After Covid-19 Immunization.Krumholz HM, Wu Y, Sawano M, Shah R, Zhou T, Arun AS, Khosla P, Kaleem S, Vashist A, Bhattacharjee B, Ding Q, Lu Y, Caraballo C, Warner F, Huang C, Herrin J, Putrino D, Hertz D, Dressen B, Iwasaki A. medRxiv. 2023 Nov 10; 2023 Nov 10. PMID: 37986769.
Cancer Relevance of Circulating Antibodies Against LINE-1 Antigens in Humans.Vylegzhanina AV, Bespalov IA, Novototskaya-Vlasova KA, Hall BM, Gleiberman AS, Yu H, Leontieva OV, Leonova KI, Kurnasov OV, Osterman AL, Dy GK, Komissarov AA, Vasilieva E, Gehlhausen J, Iwasaki A, Ambrosone CB, Tsuji T, Matsuzaki J, Odunsi K, Andrianova EL, Gudkov AV. Cancer Res Commun. 2023 Nov 8. PMID: 37870410.
Distinguishing features of long COVID identified through immune profiling.Klein J, Wood J, Jaycox JR, Dhodapkar RM, Lu P, Gehlhausen JR, Tabachnikova A, Greene K, Tabacof L, Malik AA, Silva Monteiro V, Silva J, Kamath K, Zhang M, Dhal A, Ott IM, Valle G, Peña-Hernández M, Mao T, Bhattacharjee B, Takahashi T, Lucas C, Song E, McCarthy D, Breyman E, Tosto-Mancuso J, Dai Y, Perotti E, Akduman K, Tzeng TJ, Xu L, Geraghty AC, Monje M, Yildirim I, Shon J, Medzhitov R, Lutchmansingh D, Possick JD, Kaminski N, Omer SB, Krumholz HM, Guan L, Dela Cruz CS, van Dijk D, Ring AM, Putrino D, Iwasaki A. Nature. 2023 Nov; 2023 Sep 25. PMID: 37748514.
Developing synthetic tools to decipher the tumor-immune interactome.Weizman OE, Luyten S, Lu P, Song E, Qin K, Mostaghimi D, Ring AM, Iwasaki A. Proc Natl Acad Sci U S A. 2023 Oct 31; 2023 Oct 23. PMID: 37871202.
Bartonella in Norway rats (Rattus norvegicus) from the urban slum environment in Brazil.Zeppelini CG, Oliveira D, Kosoy MY, Reis MG, Ko AI, Childs JE, Costa F. An Acad Bras Cienc. 2023; 2023 Oct 30. PMID: 37909607.
The Next Generation: Mentoring and Diversity in the Antibacterial Resistance Leadership Group.Harris AD, Souli M, Pettigrew MM. Clin Infect Dis. 2023 Oct 16. PMID: 37843116.
Priorities and Progress in Gram-positive Bacterial Infection Research by the Antibacterial Resistance Leadership Group: A Narrative Review.Doernberg SB, Arias CA, Altman DR, Babiker A, Boucher HW, Creech CB, Cosgrove SE, Evans SR, Fowler VG, Fritz SA, Hamasaki T, Kelly BJ, Leal SM, Liu C, Lodise TP, Miller LG, Munita JM, Murray BE, Pettigrew MM, Ruffin F, Scheetz MH, Shopsin B, Tran TT, Turner NA, Williams DJ, Zaharoff S, Holland TL. Clin Infect Dis. 2023 Oct 16. PMID: 37843115.
Mural cell-derived chemokines provide a protective niche to safeguard vascular macrophages and limit chronic inflammation.Pekayvaz K, Gold C, Hoseinpour P, Engel A, Martinez-Navarro A, Eivers L, Coletti R, Joppich M, Dionísio F, Kaiser R, Tomas L, Janjic A, Knott M, Mehari F, Polewka V, Kirschner M, Boda A, Nicolai L, Schulz H, Titova A, Kilani B, Lorenz M, Fingerle-Rowson G, Bucala R, Enard W, Zimmer R, Weber C, Libby P, Schulz C, Massberg S, Stark K. Immunity. 2023 Oct 10; 2023 Aug 30. PMID: 37652021.
Fishing for "complements" with vascular organoid models of microvascular disease.Gu SX, Yarovinsky TO, Hwa J. Cell Stem Cell. 2023 Oct 5. PMID: 37802032.
Structural insights into the career path between pre- and postgraduate physician-scientist training programs.Williams CS, Gallagher EJ, Rockey DC, Ajijola OA, Hu PJ, Kazmierczak BI, Kontos CD, Vyas JM, Zaidi M, Rhee KY. Elife. 2023 Oct 2; 2023 Oct 2. PMID: 37782020.
Rescue of alveolar wall liquid secretion blocks fatal lung injury due to influenza-staphylococcal coinfection.Tang S, De Jesus AC, Chavez D, Suthakaran S, Moore SK, Suthakaran K, Homami S, Rathnasinghe R, May AJ, Schotsaert M, Britto CJ, Bhattacharya J, Hook JL. J Clin Invest. 2023 Oct 2; 2023 Oct 2. PMID: 37581936.
Author Correction: SARS-CoV-2 reservoir in post-acute sequelae of COVID-19 (PASC).Proal AD, VanElzakker MB, Aleman S, Bach K, Boribong BP, Buggert M, Cherry S, Chertow DS, Davies HE, Dupont CL, Deeks SG, Eimer W, Ely EW, Fasano A, Freire M, Geng LN, Griffin DE, Henrich TJ, Iwasaki A, Izquierdo-Garcia D, Locci M, Mehandru S, Painter MM, Peluso MJ, Pretorius E, Price DA, Putrino D, Scheuermann RH, Tan GS, Tanzi RE, VanBrocklin HF, Yonker LM, Wherry EJ. Nat Immunol. 2023 Oct. PMID: 37723351.
SARS-CoV-2 reservoir in post-acute sequelae of COVID-19 (PASC).Proal AD, VanElzakker MB, Aleman S, Bach K, Boribong BP, Buggert M, Cherry S, Chertow DS, Davies HE, Dupont CL, Deeks SG, Eimer W, Ely EW, Fasano A, Freire M, Geng LN, Griffin DE, Henrich TJ, Iwasaki A, Izquierdo-Garcia D, Locci M, Mehandru S, Painter MM, Peluso MJ, Pretorius E, Price DA, Putrino D, Scheuermann RH, Tan GS, Tanzi RE, VanBrocklin HF, Yonker LM, Wherry EJ. Nat Immunol. 2023 Oct; 2023 Sep 4. PMID: 37667052.
The RhoA GTPase regulates Type I Interferon Signaling in Systemic lupus erythematosus.Fan W, Wei B, Chen X, Zhang Y, Xiao P, Li K, Zhang YQ, Huang J, Leng L, Bucala R. Res Sq. 2023 Sep 20; 2023 Sep 20. PMID: 37790522.
Incorporating efficacy data from initial trials into subsequent evaluations: Application to vaccines against respiratory syncytial virus.Warren JL, Sundaram M, Pitzer VE, Omer SB, Weinberger DM. medRxiv. 2023 Sep 18; 2023 Sep 18. PMID: 37034783.
Threatening the Future of Global Health - NIH Policy Changes on International Research Collaborations.Ko AI, Abdool Karim SS, Morel C, Swaminathan S, Daszak P, Keusch GT. N Engl J Med. 2023 Sep 7; 2023 Sep 2. PMID: 37668223.
The serotype-specific prevalence of pneumococci in hospitalized pneumonia patients with COPD: a prospective, multi-center, cohort study.Kim JY, Jung JW, Kang MJ, Kim DK, Choi H, Cho YJ, Jang SH, Lee CH, Oh YM, Park JS. Korean J Intern Med. 2023 Sep; 2023 Aug 17. PMID: 37586811.
Pyroptosis in cardiovascular diseases: Pumping gasdermin on the fire.Yarovinsky TO, Su M, Chen C, Xiang Y, Tang WH, Hwa J. Semin Immunol. 2023 Sep; 2023 Jul 19. PMID: 37478801.
An AI-powered patient triage platform for future viral outbreaks using COVID-19 as a disease model.Charkoftaki G, Aalizadeh R, Santos-Neto A, Tan WY, Davidson EA, Nikolopoulou V, Wang Y, Thompson B, Furnary T, Chen Y, Wunder EA, Coppi A, Schulz W, Iwasaki A, Pierce RW, Cruz CSD, Desir GV, Kaminski N, Farhadian S, Veselkov K, Datta R, Campbell M, Thomaidis NS, Ko AI, Thompson DC, Vasiliou V. Hum Genomics. 2023 Aug 29; 2023 Aug 29. PMID: 37641126.
Prior cycles of anti-CD20 antibodies affect antibody responses after repeated SARS-CoV-2 mRNA vaccination.Asashima H, Kim D, Wang K, Lele N, Buitrago-Pocasangre NC, Lutz R, Cruz I, Raddassi K, Ruff WE, Racke MK, Wilson JE, Givens TS, Grifoni A, Weiskopf D, Sette A, Kleinstein SH, Montgomery RR, Shaw AC, Li F, Fan R, Hafler DA, Tomayko MM, Longbrake EE. JCI Insight. 2023 Aug 22; 2023 Aug 22. PMID: 37606046.
Dectin-1 stimulation promotes a distinct inflammatory signature in the setting of HIV-infection and aging.Kumar A, Wang J, Esterly A, Radcliffe C, Zhou H, Wyk BV, Allore HG, Tsang S, Barakat L, Mohanty S, Zhao H, Shaw AC, Zapata HJ. Aging (Albany NY). 2023 Aug 21; 2023 Aug 21. PMID: 37606991.
Evidence of leaky protection following COVID-19 vaccination and SARS-CoV-2 infection in an incarcerated population.Lind ML, Dorion M, Houde AJ, Lansing M, Lapidus S, Thomas R, Yildirim I, Omer SB, Schulz WL, Andrews JR, Hitchings MDT, Kennedy BS, Richeson RP, Cummings DAT, Ko AI. Nat Commun. 2023 Aug 19; 2023 Aug 19. PMID: 37598213.
Polymer nanoparticles deliver mRNA to the lung for mucosal vaccination.Suberi A, Grun MK, Mao T, Israelow B, Reschke M, Grundler J, Akhtar L, Lee T, Shin K, Piotrowski-Daspit AS, Homer RJ, Iwasaki A, Suh HW, Saltzman WM. Sci Transl Med. 2023 Aug 16; 2023 Aug 16. PMID: 37585505.
Zika virus RNA persistence and recovery in water and wastewater: An approach for Zika virus surveillance in resource-constrained settings.Zhu K, Hill C, Muirhead A, Basu M, Brown J, Brinton MA, Hayat MJ, Venegas-Vargas C, Reis MG, Casanovas-Massana A, Meschke JS, Ko AI, Costa F, Stauber CE. Water Res. 2023 Aug 1; 2023 May 23. PMID: 37270953.
IL-7R licenses a population of epigenetically poised memory CD8(+) T cells with superior antitumor efficacy that are critical for melanoma memory.Micevic G, Daniels A, Flem-Karlsen K, Park K, Talty R, McGeary M, Mirza H, Blackburn HN, Sefik E, Cheung JF, Hornick NI, Aizenbud L, Joshi NS, Kluger H, Iwasaki A, Bosenberg MW, Flavell RA. Proc Natl Acad Sci U S A. 2023 Jul 25; 2023 Jul 17. PMID: 37459511.
COVID-19 annual update: a narrative review.Biancolella M, Colona VL, Luzzatto L, Watt JL, Mattiuz G, Conticello SG, Kaminski N, Mehrian-Shai R, Ko AI, Gonsalves GS, Vasiliou V, Novelli G, Reichardt JKV. Hum Genomics. 2023 Jul 24; 2023 Jul 24. PMID: 37488607.
MPL36, a major plasminogen (PLG) receptor in pathogenic Leptospira, has an essential role during infection.Zhu W, Passalia FJ, Hamond C, Abe CM, Ko AI, Barbosa AS, Wunder EA Jr. PLoS Pathog. 2023 Jul; 2023 Jul 24. PMID: 37486929.
Failure to Detect Influenza A H1N1 Highlights the Need for Multiple Gene Targets in Influenza Molecular Tests.Landry ML, Owen M. J Clin Microbiol. 2023 Jul 20; 2023 Jun 20. PMID: 37338345.
Macrophage migration inhibitory factor (MIF) and its homolog D-dopachrome tautomerase (D-DT) are significant promotors of UVB- but not chemically induced non-melanoma skin cancer.Huth S, Huth L, Heise R, Marquardt Y, Lopopolo L, Piecychna M, Boor P, Fingerle-Rowson G, Kapurniotu A, Yazdi AS, Bucala R, Bernhagen J, Baron JM. Sci Rep. 2023 Jul 18; 2023 Jul 18. PMID: 37464010.
The MIF promoter SNP rs755622 is associated with immune activation in glioblastoma.Alban TJ, Grabowski MM, Otvos B, Bayik D, Wang W, Zalavadia A, Makarov V, Troike K, McGraw M, Rabljenovic A, Lauko A, Neumann C, Roversi G, Waite KA, Cioffi G, Patil N, Tran TT, McCortney K, Steffens A, Diaz CM, Brown JM, Egan KM, Horbinski CM, Barnholtz-Sloan JS, Rajappa P, Vogelbaum MA, Bucala R, Chan TA, Ahluwalia MS, Lathia JD. JCI Insight. 2023 Jul 10; 2023 Jul 10. PMID: 37252795.
PROSER: A Web-Based Peripheral Blood Smear Interpretation Support Tool Utilizing Electronic Health Record Data.Iscoe MS, Loza AJ, Turbiville D, Campbell SM, Peaper DR, Balbuena-Merle RI, Hauser RG. Am J Clin Pathol. 2023 Jul 5. PMID: 37026746.
VISTA (PD-1H) Is a Crucial Immune Regulator to Limit Pulmonary Fibrosis.Kim SH, Adams TS, Hu Q, Shin HJ, Chae G, Lee SE, Sharma L, Kwon HK, Lee FY, Park HJ, Huh WJ, Manning E, Kaminski N, Sauler M, Chen L, Song JW, Kim TK, Kang MJ. Am J Respir Cell Mol Biol. 2023 Jul. PMID: 36450109.
Advances in molecular infectious diseases testing in the time of COVID-19.Peaper DR, Kerantzas CA, Durant TJS. Clin Biochem. 2023 Jul; 2022 Feb 15. PMID: 35181291.
Increasing sensitivity of antibody-antigen interactions using photo-cross-linking.Torrents de la Peña A, Sewall LM, de Paiva Froes Rocha R, Jackson AM, Pratap PP, Bangaru S, Cottrell CA, Mohanty S, Shaw AC, Ward AB. Cell Rep Methods. 2023 Jun 26; 2023 Jun 5. PMID: 37426749.
High-throughput single-cell profiling of B cell responses following inactivated influenza vaccination in young and older adults.Wang M, Jiang R, Mohanty S, Meng H, Shaw AC, Kleinstein SH. Aging (Albany NY). 2023 Jun 26; 2023 Jun 26. PMID: 37367734.
Genomic analysis of plasma circulating tumor DNA in patients with heavily pretreated HER2 + metastatic breast cancer.Lee K, Lee J, Choi J, Sim SH, Kim JE, Kim MH, Park YH, Kim JH, Koh SJ, Park KH, Kang MJ, Ahn MS, Lee KE, Kim HJ, Ahn HK, Kim HJ, Park KU, Park IH. Sci Rep. 2023 Jun 19; 2023 Jun 19. PMID: 37336919.
A pref-1-controlled non-inflammatory mechanism of insulin resistance.Huang Y, Cui D, Chen L, Tong H, Wu H, Muller GK, Qi Y, Wang S, Xu J, Gao X, Fifield KE, Wang L, Xia Z, Vanderluit JL, Liu S, Leng L, Sun G, McGuire J, Young LH, Bucala R, Qi D. iScience. 2023 Jun 16; 2023 May 19. PMID: 37283810.
High Levels of Detection of Nonpneumococcal Species of Streptococcus in Saliva from Adults in the United States.Hislop MS, Allicock OM, Thammavongsa DA, Mbodj S, Nelson A, Shaw AC, Weinberger DM, Wyllie AL. Microbiol Spectr. 2023 Jun 15; 2023 Apr 17. PMID: 37067447.
Persistence of Pneumococcal Carriage among Older Adults in the Community despite COVID-19 Mitigation Measures.Wyllie AL, Mbodj S, Thammavongsa DA, Hislop MS, Yolda-Carr D, Waghela P, Nakahata M, Stahlfeld AE, Vega NJ, York A, Allicock OM, Wilkins G, Ouyang A, Siqueiros L, Strong Y, Anastasio K, Alexander-Parrish R, Arguedas A, Gessner BD, Weinberger DM. Microbiol Spectr. 2023 Jun 15; 2023 Apr 10. PMID: 37036377.
The Impact of Coronavirus Disease 2019 on Viral, Bacterial, and Fungal Respiratory Infections.Losier A, Gupta G, Caldararo M, Dela Cruz CS. Clin Chest Med. 2023 Jun; 2023 Feb 26. PMID: 37085229.
Immunomodulatory Agents for Coronavirus Disease-2019 Pneumonia.McManus D, Davis MW, Ortiz A, Britto-Leon C, Dela Cruz CS, Topal JE. Clin Chest Med. 2023 Jun; 2022 Nov 22. PMID: 37085221.
Urothelial Oxidative Stress and ERK Activation Mediate HMGB1-Induced Bladder Pain.Ye S, Mahmood DFD, Ma F, Leng L, Bucala R, Vera PL. Cells. 2023 May 22; 2023 May 22. PMID: 37408274.
Absolute and relative excess mortality across demographic and clinical subgroups during the COVID-19 pandemic: an individual-level cohort study from a nationwide healthcare system of US Veterans.Weinberger DM, Bhaskaran K, Korves C, Lucas BP, Columbo JA, Vashi A, Davies L, Justice AC, Rentsch CT. medRxiv. 2023 May 16; 2023 May 16. PMID: 37293086.
Cytokinopathy with aberrant cytotoxic lymphocytes and profibrotic myeloid response in SARS-CoV-2 mRNA vaccine-associated myocarditis.Barmada A, Klein J, Ramaswamy A, Brodsky NN, Jaycox JR, Sheikha H, Jones KM, Habet V, Campbell M, Sumida TS, Kontorovich A, Bogunovic D, Oliveira CR, Steele J, Hall EK, Pena-Hernandez M, Monteiro V, Lucas C, Ring AM, Omer SB, Iwasaki A, Yildirim I, Lucas CL. Sci Immunol. 2023 May 12; 2023 May 5. PMID: 37146127.
The Plasma Cell Infiltrate Populating the Muscle Tissue of Patients with Inclusion Body Myositis Features Distinct B Cell Receptor Repertoire Properties.Jiang R, Roy B, Wu Q, Mohanty S, Nowak RJ, Shaw AC, Kleinstein SH, O'Connor KC. Immunohorizons. 2023 May 1. PMID: 37171806.
Excess Mortality Among Patients in the Veterans Affairs Health System Compared With the Overall US Population During the First Year of the COVID-19 Pandemic.Weinberger DM, Rose L, Rentsch C, Asch SM, Columbo JA, King J Jr, Korves C, Lucas BP, Taub C, Young-Xu Y, Vashi A, Davies L, Justice AC. JAMA Netw Open. 2023 May 1; 2023 May 1. PMID: 37155169.
Antibiotic therapy is associated with adverse drug events among older adults with advanced cancer: A cohort study.Datta R, Han L, Doyle M, Allore H, Sanft T, Quagliarello V, Juthani-Mehta M. Palliat Med. 2023 May; 2023 Mar 31. PMID: 36999898.
Molecular Characterization of Leptospira Species Detected in the Kidneys of Slaughtered Livestock in Abattoirs in Gauteng Province, South Africa.Dogonyaro BB, van Heerden H, Potts AD, Fasina FO, Casanovas-Massana A, Kolo FB, Lötter C, Byaruhanga C, Ko AI, Wunder EA Jr, Adesiyun AA. Pathogens. 2023 Apr 30; 2023 Apr 30. PMID: 37242336.
Single-cell profiling reveals immune aberrations in progressive idiopathic pulmonary fibrosis.Unterman A, Zhao AY, Neumark N, Schupp JC, Ahangari F, Cosme C Jr, Sharma P, Flint J, Stein Y, Ryu C, Ishikawa G, Sumida TS, Gomez JL, Herazo-Maya J, Dela Cruz CS, Herzog EL, Kaminski N. medRxiv. 2023 Apr 29; 2023 Apr 29. PMID: 37163015.
Adaptation of Nontypeable Haemophilus influenzae in Human Airways in COPD: Genome Rearrangements and Modulation of Expression of HMW1 and HMW2.Murphy TF, Kirkham C, D'Mello A, Sethi S, Pettigrew MM, Tettelin H. mBio. 2023 Apr 25; 2023 Mar 16. PMID: 36927061.